Questions about data from the Moderate-Resolution Imaging Spectroradiometer sensors aboard the Terra and Aqua satellites.

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How to extract EVI from MODIS hdf data from several time using MRT?

I have been using Modis Reprojection Tool (MRT) to extract EVI from MODIS hdf files. So I have 23 MODIS hdf files from 1 year (16 days temporal) but from the same scene (h28v09). How to extract EVI ...
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5 views

Land-Water mask for MODIS 0.05deg grid

I need to create a worldwide land-water mask for a series of MODIS LST/VI images (0.05 deg). I know that each MODIS hdf file contains a land-water mask. However, this mask changes between different ...
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2answers
426 views

gdalwarp changing value in nodata pixels

I'm using gdalwarp to convert MODIS NDVI mosaics from Sinusoidal to epsg:4326. To save space I'm using VRT files until I reach the final product. Here is my workflow. Mosaic NDVI Modis tiles using ...
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1answer
204 views

Switch an R script from “MODIS Reprojection Tool” to “ModisSwathTool”

This R script works with MRT (MODIS Reprojection Tool), and its performance is unbelievable for land data. The only problem is when you use Atmospheric data from Modis, like "MOD05_L2". The problem ...
2
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1answer
35 views

MODIS temperature and NDVI data?

hope anyone could give me some hints here. I tried to download free MODIS data from their page(resolution 500m, 1km). Im interested in NDVI and temperature data. But when i load the hdf files into my ...
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9 views

MODISTool R Error: Can't call method “prepare”

I have already used Modistool in R a few times, but lately I am facing the following error while using the function GetProducts(), GetBands(Product = "MOD13Q1") MODISTools::GetProducts() Error in ...
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1answer
206 views

How to download the MODIS data from R using MODISTools library

I want to download MODIS product MOD13Q1 to use the Scientific Data Sets (SDS) layers of "250m_16_days_EVI", "250m_16_days_pixel_reliability". MODISTools library in R software provides the capability ...
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1answer
41 views

smoothing raster layer stack using R

I'm trying to do smoothing for .tif stack layer of 331 bands. I used this code in R : setwd("D:\\") raster_dir <- "D:\\Modis VI quality\\" VI <- ...
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26 views

Smooth raster stack

How can I smooth a raster stack of 300 bands using R/Arcgis/Envi? I used this code: setwd("D:\\") raster_dir <- "D:\\Modis VI quality\\" x <- brick(paste(raster_dir, ...
2
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1answer
243 views

applying savitzky golay filter to modis ndvi data

I want to smooth the ndvi MODIS 16 bit integer data .tif for LULC classification . i have timesat 3.1 software on windows but i don't how to apply the SG filter . i am not that good in programming . i ...
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13 views

MODIS MCD43A3 albedo product: good quality observation and fill value at the same time?

I’m using the MODIS MCD43A3 albedo product on one of my projects. I only used the good-quality values determined based on the BRDF_Albedo_Quality band recorded in the associated MCD43A2 product. ...
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1answer
19 views

Raster Mosaic fault using R

I'm trying to mosaic two raster images using R. I used this script: setwd("D:\\Modis EVI\\") raster_dir <- "D:\\Modis EVI\\" r1 <- brick(paste(raster_dir,"evi8_stack.tif", sep="")) r2 <- ...
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0answers
21 views

How to convert .HDF to .Tiff and keep the number of the output files exactly as the input?

I have 332 .HDF files that I have processed in R to convert them to .Tiff. It has worked fine, however, the number of output files are not the same as the number of the input files! Input is 332, ...
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1answer
29 views

how to create raster stack using R

I have 300 .tiff files, that i need to create raster stack of them. Can you please help me with R code for that? I can do in Arcgis, Envi, R. I have tried: setwd("F:\\MODIS\\Modis EVI\\HDF8 EVI") ...
4
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2answers
129 views

How to correctly parse MODIS QA layers?

I'd like to correctly parse the MOD13Q1 VI Quality layer (see Table 2 in "layers" here). For this, I'm trying to follow Example 1 from this tutorial (page 10). I'll illustrate my problem with a pixel ...
2
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1answer
51 views

Recommendation for getting TIF raster from modis HDF, for processing in R

I've downloaded a set of modis mod13q1 HDF files, e.g. MOD13Q1.A2016097.h11v05.006.2016114040325.hdf. I'd like to load the 250m_16_days_EVI and 250m_16_days_pixel_reliability bands into R as rasters. ...
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1answer
340 views

split multi-band raster to separate rasters in ERDAS IMAGINE

I am currently using ERDAS IMAGINE 2013. I have a 28 Band MODIS image. Is there any way in IMAGINE I could split the 28 bands of the MODIS image into single band images?
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3answers
88 views

32-days composite using LST 8-days Data

I want to make a 32-days composite from 8-days LST data by taking its average value, but I am facing a problem in checking QC-day, the other thing is, due to data gaps (missing DN values) we cannot ...
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1answer
219 views

Maintaining spatial integrity of Matlab matrix with missing data

I am working with MODIS Terra imagery (MOD13Q1). I am currently trying to compute the autocorrelation structure of the pixels in an MODIS NDVI raster. The problem is that I have clipped the original ...
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0answers
47 views

how to convert the values of NDVI anomalies in percentage?

I have used NDVI-MODIS MOD13Q1 product to calculate NDVI anomaly for 13 years (2000-2012). I multiplied the product with the scale factor 0.0001. the problem that I am facing is that the, High and ...
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1answer
39 views

MODIS data with .hdf extension not compiling in Ubuntu

I am trying to use GDAL to read .hdf file, but it does not seem to recognize the extension. It works fine in Windows system. The GDAL open command gives the following error message: ERROR 4: ...
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0answers
61 views

Troubling using MODIS package in R (mac). Error with gdal

I'm new to using MODIS data, and have been trying to set up a a way to use the HDF files produced by MODIS on R. I had trouble with gdal (could only download the package through system dialog), and ...
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2answers
117 views

Analysis MODIS NDVI - MOD12A2

I am new here and also in remote sensing. I am trying to analyse the images that I downloaded from MODIS, which are the Vegetation Indices 16-Day L3 Global 1km. With that I want to analyse the change ...
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1answer
101 views

HDF to Geotiff conversion

can anyone tell the program code or script for converting HDF files to geotiff using MRTSwath tool? I've downloaded MODIS Files for fog estimation but i couldn't find how to process them.
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1answer
249 views

Error in downloading MODIS image using R script

I am trying to download "MOD13A3" MODIS image using R script (http://r-gis.net/?q=ModisDownload) but each time it's ending in error. How to make it work ? ...
0
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1answer
57 views

GDAL 2.0.1/QGIS 2.14.0 on OSX won't open MODIS HDF?

I'm on OSX 10.9.4, using GDAL 2.0.1 from the terminal. I want to mosaic MCD12Q1 HDFs together with GDAL but my build can't even read them. The file: ...
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1answer
45 views

Downloading MODIS data of cloud cover less than 10%

I use ModisDownload from rts package for downloading MODIS data. But is it possible to specify cloud cover and view angle before downloading? e.g. if I want to download MODIS data for cloud cover less ...
2
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1answer
43 views

How do you extract the mean fire frequency (raster) for each point within a given buffer size using R?

I am trying to extract fire data (mean and max fire frequency) for each point within a given buffer size (250m) around multiple points. Currently, my point data is in Lat and Long. For the raster ...
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0answers
45 views

MODIS Quality Control in QGIS

I have to process 46 MODIS MOD15A2H images (leaf area index) in QGIS 2.12 Lyon. I have to clean the images from bad pixels using MODIS Quality Control. Is there any method to automate the process for ...
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1answer
54 views

Calculating maximum value in Raster Calculator of ArcGIS for Desktop?

I have MODIS NDVI data of four months and I have to calculate NDVImax. I am using the Raster Calculator of ArcGIS and have been using various algorithms like [MAX ("june2000", "july2000" , ...
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1answer
84 views

Changing the the range for MODIS NDVI

I need to get MODIS NDVI (MOD13A3), but output from EarthExplorer or Daac2Disk HDF format is a numerical range is -2000 to 9996. But I need for futher work basic range -1 to 1. Is there any ...
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1answer
61 views

Doubt in MODIS NDVI range [duplicate]

MODIS-NDVI product MOD13Q1 shows range from -1986 to 9976 but NDVI ranges from -1 to 1. What these value means? What do I need to do as corrections? I have attached an image showing MODIS-NDVI ranges ...
3
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2answers
813 views

Cannot properly import MODIS MOD07_L2 .hdf files into R using rgdal

I've been trying to accurately import and process some .hdf files from the MODIS Atmospheric Profile product (MOD07_L2) in R for several days now. Still, there's something going wrong during data ...
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0answers
54 views

Time series linear interpolation method for cloud not processing properly in my MODIS dataset

I am trying to perform an interpolation to my 3D array (sub-block of MODIS time series dataset with a shape of (46,960,960)) using numpy linear interpolation method to replace cloud pixels with ...
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2answers
42 views

Modis MOD11A1 band math expression

I am trying to calculate the temperature of MOD11A1 and I can't find the expression of band math. How the expression temp < 273 could be written at band math?
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0answers
19 views

Why there is a shif in MODIS coordinate (compared with Landsat/google earth image) after mosaicing and subsetiing the study area?

I am facing some difficulties in processing MODIS data set. To have MODIS data over my study area, I need to mosaic two tiles of MODIS (h29 v12 and h30 v12). I have used the MRT tool by NASA (the ...
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0answers
90 views

MODIS R Package: GDAL Not Available

I am trying to analyze the MODIS EVI 250m, 16day dataset. I found the R MODIS package and am following the instructions here: ...
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1answer
35 views

WMS for Active Fire Data from NASA site - Can't connect

I am trying to connect to the WMS service of the Active Fire Data that NASA provides. This is the site: https://firms.modaps.eosdis.nasa.gov/web-services/#firms-wms where I get the links from. My ...
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0answers
43 views

How to reproject MODIS L2 data with lat/lon

I downloaded the MODIS level 2 data for precipitable water vapor (MOD05_L2.A2015193.1535.006.2015194020321.hdf) and the corresponding geolocation file (MOD03.A2015193.1535.006.2015193213734.hdf). When ...
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0answers
20 views

MOD09A1 QC layer

Does anyone know how to handle MOD09A1 Quality flags (QC) in in R? I was trying to use raster package but unable to unlock the QC band.
4
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1answer
480 views

How can I parse modis MOD13Q1 quality layers in R?

I'd like to parse MOD13Q1 VI quality layers in R. My original code must have been incorrect, because it gave lots of "deep ocean" flags in the middle of Brazil. After the changes suggested by ...
0
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1answer
270 views

mosaicking and projecting modis land cover data MCD12Q1

I have modis land cover MCD12Q1 data .Its in the sinusoidal projection (.hdf native format ). I have to study the land cover characters from the data for which i have to convert them into .tif format ...
1
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1answer
28 views

transformations from a sphere using R for raster and polygon data [duplicate]

I am planning on using the MODIS burned area products which were produced by Maryland University. These come as either polygons or rasters. In the user guide it says A shapefile version of the MCD45 ...
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1answer
217 views

Using Quality Control process for MODIS Leaf Area Index?

Anyone can help in explaining how I can apply Quality Control (QC) for MODIS Leaf Area Index (LAI) to extract the valid pixels of LAI using ArcMap?
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0answers
358 views

Conversion problem of projection of MODIS LAI from sinusoidal to geographic

I am trying to change MODIS data's (LAI) sinusoidal projection to geographic. Actually I did it. But when I reproject it by ERDAS, the output LAI raster moved about 10 km to west side of actual shape ...
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0answers
35 views

How to apply/mask QC layer of MODIS15A2 for extracting good quality pixels from Leaf Area Index product

How to mask cloudy/noise pixels of MODIS LAI product (MODIS 15A2). I'm using MODIS 15A2 LAI monthly data for LAI estimation. After reprojection and applying scale factor I want to mask bad pixels of ...
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0answers
10 views

Corrupt XML files on LP DAAC server

I have built a Python script to pull MODIS data off the LP DAAC server. The script works fine in most locations, but when I tried to pull data for Bangladesh (h26v06), my code threw errors. I ...
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2answers
65 views

MODIS MOD11A1 Reproject Change Data Value

I'm import and reprojected MOD11A1 with GDAL 1.10....my shell script is easy.. for file in *.hdf; do echo "map: $file" gdal_translate -of Gtiff -ot Int16 ...
-1
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1answer
107 views

How do I subset image by vector layer using Erdas Imagine?

I have downloaded MODIS MOD10A2 8 day snow cover image. I need to subset this image. I tried to subset the image in erdas. it says the AOI layer is empty.
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1answer
650 views

Format MODIS HDF to Geotiff in MRT

Am using Modis Reprojection Tool (ModisTool) on MODIS LST data (MOD11A1) to convert to GeoTiff format. When I run it I get this error message: Error: OpenGeoTIFFFILE: Opening Output Image File ...