SAGA (System for Automated Geoscientific Analyses) is a GIS toolbox with many modules that can be used from the GUI, command line or accessed through R,python or directly using C++.

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44 views

Select polygons that do not intersect any other polygon using QGIS, GRASS, SAGA or R

I would like to select the polygons of the layer below that do not intersect with any other polygon (within the same layer). How can I do this using QGIS, GRASS, SAGA or R?
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2answers
15 views

Create a common scale for different raster layers in GRASS, SAGA or QGIS

I have a number of layers that represent the temperature variability of the water in a lake. They have been generated trough interpolation and have different values as they represent temperatures ...
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15 views

Calculating rows in a attribute table of a point shape with QGis or Saga

I have a point shape with an attribut ("test"). I need to calculate the sum of the 1st four (id 1-4) "test" values and then the next 4 (id 5-8). Is there a chance to calculate this with the field ...
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0answers
25 views

What steps does SAGA GIS take when calculating Topographic Wetness, specifically when handling depression filled (by ArcMap) DEM

I am a grad student involved with hydrological modeling. In the model I work on, we are calculating the Topographic Index (TI; without transmissivity - or set to 1) using Quinn's MFD algorithm. We do ...
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0answers
33 views

Is the SAGA tool Basic terrain analysis included in Processing?

I can't find the saga tool Basic terrain analysis in the Sextante/processing toolbox. Is this not included or is there a chance to install it?
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9 views

saga_api python library : raise AttributeError(“No constructor defined”)

Good morning, I'm traying to execute a python script using saga_api library, unfortunately I'm stoped in the first step :(. when I tray to execute this command on python: ...
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2answers
31 views

Missing Dependency in SAGA. Orfeo Toolbox does not work

Hej guys, I am trying to perforem segmentation from Orfeo Toolbox (QGIS last version 2.2), whenever I try to use the toolbox, I get the following message: Oooops! The following output layers could ...
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2answers
53 views

How to create a time series with a NetCDF raster from Ensembles E-OBS using GDAL, R, GRASS GIS or SAGA GIS

I downloaded a NetCDF file that contains daily precipitation values from 1-1-1950 to 30-6-2013. The raster has 23191 bands. http://eca.knmi.nl/download/ensembles/download.php My goal is to analyze ...
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1answer
95 views

Calculating Topographic Wetness Index (choosing from different algorithms)

Topographic Wetness Index can be expressed as Ln(a/tanB) based on the idea of Beven and Kirkby (1979) where a is the spesific catchment area (a=A/L, catchment area (A)divided by contour ...
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67 views

Defining the boundary of a catchment area

I digitized contour lines from topographic maps and created a DEM. With the DEM, I estimated the boundary of a catchment area. Estimated positional accuracy of topographic maps is RMSE = 65 m, with a ...
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2answers
33 views

How to show cell values of raster in ArcGIS

I would like to know if it is possible to display a raster cell value in the center of a cell with ArcGIS in the same way that SAGA-GIS does when you zoom in.
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2answers
81 views

Merging DEMs of different grid size

I'm trying to merge two grids with different cell size. One has a cell size of 10m and the other 50m. The 10m one covers a subarea of the 50m one. I know that the most accurate one is the 10m one and ...
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0answers
52 views

QGIS cannot open output layers

I have problem with QGIS 2.0.1. Everytime I run tool from SAGA or GRASS, I get exactly the same error, for example: Oooops! The following output layers could not be open Channel Network: ...
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27 views

Ordinary kriging in saga GIS?

I'm trying to do ordinary kriging using SAGA 2.0.8 or 2.1.0, I succesfully (I think) created the Grid System by the menu modules>>grid>>construction>>create grid system (adding it to the map there is ...
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35 views

Extra row and column in a raster after GDAL grid import

I'm exporting an ESRI grid to TIFF format and after that I'm reading this exported raster file into SAGA GIS. However when Saga reads this file in there appears to be an additional row and column in ...
3
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0answers
95 views

How to configure QGIS and SAGA on Ubuntu (12.04 and others)?

During the past weeks, I have tried QGIS to recognize SAGA via the processing toolbox, both being installed from the ubuntugis-unstable repository. I have tried this on several virtual ubuntu ...
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2answers
71 views

Enabling SAGA in QGIS

A similiar question has been asked recently, however I have some specific queries and process I have tried which are probably better in its own thread for clarity. Hope this is ok. See link to recent ...
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1answer
89 views

How to make GRASS and SAGA tools capable to use in QGIS?

As my title, I installed Qgis, GRASS and GDAL by osGeo4w package, and as I finish the installation, I want to use GRASS tool, I face this problem: But I already installed GRASS and SAGA, how to make ...
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20 views

Re-projecting WGS84 to OSGB in SAGAGIS

I took some points with a GPS, and I'm trying to convert from GCS to OSGB 1936 British National Grid in SAGAGIS. I'm working with a shapefile. To reproject the vector layer to the OSGB projection I ...
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2answers
90 views

How to interpolate a point vector layer inside a boundary (polygon layer) QGIS/GRASS/SAGA?

I have a to create a heatmap of water temperatures inside a lake for which I have sample points. The map should look much like the climate maps generated by climate change models. I have the ...
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1answer
84 views

Apply r.neighbours or Neighbourhood analysis (LecoS plugin for QGIS) to 3000 rasters

I need to apply r.neighbours or Neighbourhood analysis (QGIS plugin LecoS (or equivalent) to 3000 rasters and define a neighbourhood of 5 x 5 and calculate the mean. I suppose I need to create a ...
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17 views

MSHP file from SAGA tough to delete

After running a SAGA line dissolve process in QGIS, an MSHP file is created (amongst other things). Fine by me, though I'm not sure what it's used for (metadata in XML format?). Problem is that it ...
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149 views

SAGA/GDAL fails to open grid in QGIS 2.0.1 on OSX 10.6.8

I want to try different grid/raster spline interpolation methods using SAGA in QGIS. I'm using the kyngchaos build 2.0.1-7 for Snow Leopard. Every SAGA algorithm I try gives the following in a popup: ...
8
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1answer
233 views

Where is this raster offset being introduced in the QGIS processing toolbox?

I'm using the (awesome!) processing toolbox in QGIS 2.0 to reclassify some NoData values in a raster from -9999 to 0, but at some point in the process there's an offset of about 0.2 degrees being ...
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2answers
123 views

How to set all pixels with value <= 0 to “nodata” in DEM raster?

I have a DEM raster with pixel values between about 3000 and -0.0003. I need to set all pixel with a value of 0 and smaler (<=0) to "nodata" (for later raster calculations and to reduce the ...
3
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1answer
146 views

How to build a confusion matrix for image classification using SAGA or QGIS?

I did a supervised classification of a Landsat image subset using my training data polygons. I used SAGA GIS for that and everything worked out fine. Now I am stuck since I have no clue how to ...
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92 views

Kriging with SAGA and QGIS

I have the "processing" toolbox installed on QGIS2 and it would appear to give me access to the SAGA variogram tools and and kriging tools. What I am missing and what I can't find via Google either, ...
3
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1answer
112 views

Debugging errors of SAGA interpolation algorithms in QGIS 2.0 Processing

I encounter recurrent problems with the geoalgorithms that perform interpolations. No matter technique I use I end with the following errors. As state in OGR tab QGIS is unable to open a file in C ...
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2answers
149 views

How to calculate peaks in a DEM

How could I extract all peaks from a DEM (large mountainous area)? Peak means something like: a pixel which is sourrounded by other pixels with smaler elevation numbers in a area arround the ...
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1answer
94 views

SAGA_CMD batch processing

I am trying to use SAGA to triangulate a set of .las files I have. I have tiled them using lastools, since the single file was too big for my computer to handle. I wonder, can I use the saga_cmd ...
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1answer
63 views

What is the best way to display point data (with standard deviation) using QGIS/SAGA/Manifold?

I would like to display point data values (indicating biomass at a point) but also to show the standard deviation value for each point. What would be the best method to do this in QGIS (I'm a basic ...
2
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0answers
115 views

Watershed Segmentation SAGA-GIS

I'm trying to segment a topographic map to vectorize it. I'm using the watershed algorithm of SAGA-GIS. It's working fine with polygons, but with roads or contour lines is not working properly. Here ...
4
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2answers
151 views

How to de-noise a DSM

I have created a DEM, DSM, and nDSM from a LiDAR Point Cloud using SAGA-GIS. I extracted the appropriate returns from the point cloud, then converted to grid, and then closed gaps to fill in any ...
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0answers
36 views

problem on loading kriging outputs [duplicate]

My problem is the following: everytime i run ordinary kriging or other interpolation techniques i obtain this error message from QGIS Notice that these are the details for SAGA I would like a ...
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3answers
114 views

how to decrease Raster size without altering cell size?

Is there a way to decrease the size of a raster image without decreasing cell size or quality? I´m using ArcInfo but also have Saga-Gis or FME. I could abviously change an 8bit raster to a 1bit ...
0
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1answer
208 views

Calculating longest flow path and avg. slopes for catchments with qgis?

I am a hydrologist and their are 2 important pieces of information I need for modeling. I need to know the longest flow path for each sub catchment in my area of interest and I need to know the ...
8
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1answer
305 views

Import GRASS and SAGA modules to python script

I'm new at this. I am "building" a python plugin for qgis and I want to import modules from GRASS and SAGA but I don't understand how to do it. The plugin I want to import is Kriging interpolation ...
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0answers
97 views

Saga Reclassify grid problem

I am using Qgis 2.1 ver. 5f5cd4c (64 bit version on win7 64) OSGeo installed. I was trying to reclassify a DEM in EPSG:32614. I used the SAGA's Reclassify algorithm in the processing toolbox. I ...
0
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1answer
139 views

problem in loading outputs from processing tool (sextante) [duplicate]

hopefully some of you have got an answer to what happens to me when i run (so far) all the processing tools for carrying out raster analyses. This is the type of message i receive from QGIS (2.0.1 ...
2
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1answer
122 views

Automating non-trivial workflow in SAGA-GIS

My problem: I have two DEMs, one rectangular and containing the other. Both are given in grid formats and the outer one has gridsize 50m, the inner one 10m. I want to 'embed' the smaller one in the ...
0
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1answer
97 views

Variogram Software

I would like to know wich software are suitable to create Variograms and to know sill, nugget and range easily. I would prefer if this software could run in Linux. I've tried SAGA but lacks a lot ...
2
votes
1answer
101 views

What does the “Standard Distance” output from the spatial point pattern analysis in QGIS 2 represent?

I have a cluster of points and I am using the Spatial point pattern analysis tool from the processing toolbox in QGIS 2. I am having trouble understanding what the "Standard Distance" output is? It ...
2
votes
2answers
816 views

QGIS 2.0.1 Dufour on Windows 8 64-bit: Processing toolbox always produces error saying output layers could not be opened

I have tried to use the Processing Toolbox in QGIS 2.0.1 a couple of times now (using SAGA and OTB) and in both cases the processing tools always return an error along these lines: "Problem loading ...
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0answers
137 views

Problems with SEXTANTE

maybe the answer is somewhere, but i can't find it right now... I'm getting problems with SEXTANTE and algorithms with GRASS, SAGA... Always is the same, they can't open the files, the error is the ...
4
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1answer
1k views

How to install SAGA 2.1 with QGIS dufour on Windows?

I need that someone tell me how i can install saga in qgis 2.0 correctly in windows, because if I install QGIS 2.0 and when I try to use SAGA I get this Missing dependency.This algorithm cannot be ...
2
votes
2answers
1k views

Installing qgis 2.0 and saga 2.1 on ubuntu 13.04

I have been trying to get this working for a few weeks now. I am trying to install QGIS Dufor (2.0.1) and Saga GIS from the Unstable branch of the UbuntuGIS PPA. When I attempt to do this I get the ...
2
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1answer
225 views

Kernel Density Error in QGIS Processing

I have been getting this error when trying to create kernel density maps using QGIS 2.0.1 and SAGA 2.1.0. It seems to occur only when the extent is large, i.e. the entire state of Texas. If I do it on ...
2
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1answer
110 views

Creating New Modules in Saga GIS

I have recently started development with SAGA and have run into some difficulties. I have checked out the svn code base and have successfully compiled in VS-10 (except the project ViGrA). Now I just ...
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1answer
61 views

How can I import data from Excel to SAGA?

I have just started using SAGA and I want to plot some geographic coordinates (latitudes and longitudes) and I want to import them from Excel. Please tell me what to do from Excel to when the points ...
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1answer
233 views

saga 2.0.8 and gqis 2.0.1 on ubuntu 13.04

is it possible to have saga 2.0.8 and qgis 2.0.1 installed on ubuntu 13.0 4at the same time? I have the ubuntugis-repositoy activated and I got no problem with qgis and grass, but it seems impossible ...