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QGIS Georeferencer and Coordinate Systems

I'm having an issue with Ubuntu and Windows versions of QGIS where the georeferencer does not properly assign the coordinate system to the output raster. When I assign the output CRS to 'EPSG:900913 ...
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Why can't r.patch find the rasters?

I have elevation rasters which loaded just fine in a GRASS session. They represent adjacent areas, so I want to meld them into one raster. I ran r.patch using the GRASS GUI, and it would only accept ...