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Let me give you some suggestions: For SFM workflow you can use VisualSFM (http://ccwu.me/vsfm/). It is free for non-commercial use. Here you can also transform coordinates using GCP or GPS data in EXIF file of images/input gps file. The output of PMVS can be stored and opened in Meshlab. From there you can export .ply file (I guess should not be saved as ...

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