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It looks like you are using an SVN checkout of JTS? You need to compile it then. Alternatively just use the precompiled binaries from http://sourceforge.net/projects/jts-topo-suite/files/jts/


I would recommend you using Python OGR API for creating workflows. Here is a link to a good tutorial how to install GDAL/Python etc on Windows. You will find tons of workflow examples in the internet.

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