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I have 2 IFeatureClass and I want to do an INTERSECT between the two. What is the best way to do this from ArcObjects?

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    Please explain what you mean by intersect... do you want to find overlapping/intersecting features from one feature class or clip the geometries? Aug 27, 2014 at 22:01

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Presuming that you mean a feature selection (select by location) and not a geoprocessing intersect then I think you want ISpatialFilter. This allows the same actions as SelectLayerByLocation including overlap type options and attribute queries.

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