dependency ‘stringr’ is not available for package ‘rgeos’

Question

Attempting to install rgeos package fails. Detailed error logs as follows:-

> install.packages("rgeos", repos="http://R-Forge.R-project.org")
Installing package(s) into ‘/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14’
(as ‘lib’ is unspecified)
Warning: dependency ‘stringr’ is not available
trying URL 'http://R-Forge.R-project.org/src/contrib/rgeos_0.1-15.tar.gz'
Content type 'application/x-gzip' length 166974 bytes (163 Kb)
opened URL
==================================================
downloaded 163 Kb

ERROR: dependency ‘stringr’ is not available for package ‘rgeos’
* removing ‘/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/rgeos’

The downloaded packages are in
    ‘/private/var/folders/4l/rd4wl50x52n504t2vzqskhhc0000gn/T/RtmppBNwSt/downloaded_packages’
Warning message:
In install.packages("rgeos", repos = "http://R-Forge.R-project.org") :
  installation of package ‘rgeos’ had non-zero exit status
> install.packages("stringr", repos="http://R-Forge.R-project.org")
Installing package(s) into ‘/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14’
(as ‘lib’ is unspecified)
Warning message:
In getDependencies(pkgs, dependencies, available, lib) :
  package ‘stringr’ is not available (for R version 2.14.0)

Suggestions?

Calvin Cheng · Accepted Answer · 2011-12-30 12:16:58Z

There appears to be some problem with installing the copy of rgeos from repos = "http://R-Forge.R-project.org".

I used the Singapore mirror and the installation worked out fine.

Installing package(s) into ‘/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14’
(as ‘lib’ is unspecified)
--- Please select a CRAN mirror for use in this session ---
Loading Tcl/Tk interface ... done
also installing the dependencies ‘itertools’, ‘iterators’, ‘plyr’, ‘stringr’

trying URL 'http://cran.stat.nus.edu.sg/src/contrib/itertools_0.1-1.tar.gz'
Content type 'application/x-gzip' length 15595 bytes (15 Kb)
opened URL
==================================================
downloaded 15 Kb

trying URL 'http://cran.stat.nus.edu.sg/src/contrib/iterators_1.0.5.tar.gz'
Content type 'application/x-gzip' length 274267 bytes (267 Kb)
opened URL
==================================================
downloaded 267 Kb

trying URL 'http://cran.stat.nus.edu.sg/src/contrib/plyr_1.6.tar.gz'
Content type 'application/x-gzip' length 361576 bytes (353 Kb)
opened URL
==================================================
downloaded 353 Kb

trying URL 'http://cran.stat.nus.edu.sg/src/contrib/stringr_0.6.tar.gz'
Content type 'application/x-gzip' length 20551 bytes (20 Kb)
opened URL
==================================================
downloaded 20 Kb

trying URL 'http://cran.stat.nus.edu.sg/src/contrib/rgeos_0.1-15.tar.gz'
Content type 'application/x-gzip' length 171187 bytes (167 Kb)
opened URL
==================================================
downloaded 167 Kb

* installing *source* package ‘iterators’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   ‘iterators.Rnw’ 
   ‘writing.Rnw’ 
** testing if installed package can be loaded

* DONE (iterators)
* installing *source* package ‘itertools’ ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (itertools)
* installing *source* package ‘plyr’ ...
** libs
*** arch - x86_64
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64  -I/opt/local/include    -fPIC  -pipe -O2 -m64 -c loop-apply.c -o loop-apply.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64  -I/opt/local/include    -fPIC  -pipe -O2 -m64 -c split-numeric.c -o split-numeric.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/opt/local/lib -o plyr.so loop-apply.o split-numeric.o -L/opt/local/lib/R/lib/x86_64 -lR
installing to /Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/plyr/libs/x86_64
** R
** data
**  moving datasets to lazyload DB
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (plyr)
* installing *source* package ‘stringr’ ...
** package ‘stringr’ successfully unpacked and MD5 sums checked
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (stringr)
* installing *source* package ‘rgeos’ ...
** package ‘rgeos’ successfully unpacked and MD5 sums checked
geos-config: geos-config
GEOS: 3.3.0
CPPFLAGS: -I/opt/local/include
LIBS: -L/opt/local/lib -lgeos
configure: creating ./config.status
config.status: creating src/Makevars
** libs
*** arch - x86_64
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c gpc_geos.c -o gpc_geos.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c init.c -o init.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c local_stubs.c -o local_stubs.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos.c -o rgeos.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_R2geos.c -o rgeos_R2geos.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_bbox.c -o rgeos_bbox.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_buffer.c -o rgeos_buffer.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_coord.c -o rgeos_coord.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_geos2R.c -o rgeos_geos2R.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_misc.c -o rgeos_misc.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_poly2nb.c -o rgeos_poly2nb.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_predicate_binary.c -o rgeos_predicate_binary.o
rgeos_predicate_binary.c: In function 'rgeos_relate':
rgeos_predicate_binary.c:114: warning: passing argument 5 of 'rgeos_binpredfunc' from incompatible pointer type
rgeos.h:155: note: expected 'p_binpredfunc' but argument is of type 'char * (*)(struct GEOSContextHandle_HS *, const struct GEOSGeometry *, const struct GEOSGeometry *)'
rgeos_predicate_binary.c: In function 'rgeos_binpredfunc':
rgeos_predicate_binary.c:142: warning: comparison of distinct pointer types lacks a cast
rgeos_predicate_binary.c:162: warning: comparison of distinct pointer types lacks a cast
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_predicate_unary.c -o rgeos_predicate_unary.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_topology.c -o rgeos_topology.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_topology_binary.c -o rgeos_topology_binary.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_validate.c -o rgeos_validate.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -I/opt/local/lib/R/include -I/opt/local/lib/R/include/x86_64 -I/opt/local/include -I/opt/local/include -I"/Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/sp/include"   -fPIC  -pipe -O2 -m64 -c rgeos_wkt.c -o rgeos_wkt.o
/opt/local/bin/gcc-mp-4.4 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/opt/local/lib -o rgeos.so gpc_geos.o init.o local_stubs.o rgeos.o rgeos_R2geos.o rgeos_bbox.o rgeos_buffer.o rgeos_coord.o rgeos_geos2R.o rgeos_misc.o rgeos_poly2nb.o rgeos_predicate_binary.o rgeos_predicate_unary.o rgeos_topology.o rgeos_topology_binary.o rgeos_validate.o rgeos_wkt.o -L/opt/local/lib -lgeos -lgeos_c -L/opt/local/lib/R/lib/x86_64 -lR
installing to /Users/calvin/R/x86_64-apple-darwin11.2.0-library/2.14/rgeos/libs/x86_64
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded

* DONE (rgeos)

The downloaded packages are in
    ‘/private/var/folders/4l/rd4wl50x52n504t2vzqskhhc0000gn/T/RtmpoW3Gja/downloaded_packages’

Stack Exchange Network

dependency ‘stringr’ is not available for package ‘rgeos’

1 Answer 1

Your Answer

Not the answer you're looking for? Browse other questions tagged
r
rgeos
or ask your own question.

Hot Network Questions

dependency ‘stringr’ is not available for package ‘rgeos’

1 Answer 1

Your Answer

Sign up or log in

Post as a guest

Not the answer you're looking for? Browse other questions tagged rrgeos or ask your own question.

Related

Hot Network Questions

Not the answer you're looking for? Browse other questions tagged
r
rgeos
or ask your own question.