All of the Geopackages stored on one of my drives (D:/) appear to be corrupted, and don't work, but work fine if they are copied to another drive. The other file formats on the same drive all work fine (shape files, tiffs, csv, etc). Any geopackage on my drive D:/ that I've tried to open with QGIS cannot be opened by other software (eg R) until it has been moved to another location.
The error also crops up when I try creating a new geopackage in the drive, but can create them in other locations. QGIS creates an empty geopackage, but then says it's not a valid data source and will not add it to the map.
I can create a geopackage using R on my drive D:/ and it works fine until I try opening it with QGIS, at which point it is not openable by either program.
I updated QGIS from version 3.2.0 to 3.2.3 after this problem showed up, but it did not change the behavior.
Does anyone know why Geopackages would stop working in one location, and how to fix it? Using a different location isn't a great solution because the drive D:/ is the primary drive I use for GIS projects.