I'm trying to clip ~300 rasters from a time series by vector masks to extract only reliable pixels - the vector polygons are different per raster. The file names are corresponding eg.
When using batch processor of the "clip raster by mask layer" tool I can add a whole directory of files to either the input or mask column, but if I then add a directory for the other it loads below the rows containing data in the other column, and auto-fills the missing column with a single raster or mask layer.
Is there a way to match the raster and mask layer in the batch processor? It seems like there must be a quicker way to do this than manually select the matching layers.
I'm not a Python user, but I'm familiar with R if there's an easier solution that way.