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GDAL (Geospatial Data Abstraction Library) is an open source translator library for raster and vector geospatial data formats.
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gdalwarp cutline along with shapefile
You need to use the -dstalpha option to gdalwarp e.g.:
gdalwarp -cutline INPUT.shp -crop_to_cutline -dstalpha INPUT.tif OUTPUT.tif
This will add an alpha band to the output tiff which masks out th …