Biomedical informatician. Currently building a RDF semantic model of a biobank database, with data instances, using R, SPARQL, GraphDB, OWL, Python and Scala.
Also providing analyses in metagenomics, gene expression, pathway analysis and related areas to various academic and commercial groups through my consulting business, Phaseolus Consulting (http://phaseolus.biz/)
Preferred tools: RStudio, Jupyter or similar Notebooks, SQL, SPARQL, SVG, AWS and Linux (esp. Ubuntu or CentOS.)
Personal interests: mountain biking, spicy vegetarian food, mindfulness meditation
Philadelphia, PA, United States
Member for 3 months
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Last seen May 21 at 18:44