Geographic Information Systems

Questions tagged [parallel-processing]

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Use this tag when asking questions about multi or parallel processing - a programming paradigm used to speed up computationally intensive geoprocessing tasks by executing them over multiple CPU cores or threads.

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Creating indexes with PostGIS using all CPU cores

I have to run a whole bunch of GIST index creation, on some tables containing lots of records (scale of many countries, OSM data): CREATE INDEX CONCURRENTLY IF NOT EXISTS osm_footways_gist ON ...
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2answers
72 views

Fastest way to perform focal operations using R

I know there are already some questions out there discussing this issue, for example: How parallelize the extract function for raster files in R? Increasing speed of crop, mask, & extract raster ...
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30 views

Big data and spatial regression: how to make spml more efficient in R?

I am running a spatial panel regression in R using spml from package splm. When I conduct this on about 1/200th of my data, the program executes. But when I try to do so on a third of my data, R uses ...
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1answer
29 views

Parallel process for spatial weights matrix production in R

I have an sf object pData that is rather large (300,000 polygons) and I am trying to produce spatial weights for each polygon: tilesNb=knn2nb(knearneigh(st_centroid(pData), k = 2)) tilesWeights=...
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37 views

Speed up zonal statistics with additional calculation

I have two rasters, one is a classified image and the other the corresponding probabilities for a correct classification. Now I need to calculate zonal statistics for polygon segments in the following ...
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1answer
38 views

Use multiprocessing to speed up rebuild index in ArcPy

We are in ArcGIS 10.6.1 (on Windows Server 2012) and Enterprise GeoDatabase Oracle 19c (on Linux). I was wondering if it is feasible to use the Python's ProcessPoolExecutor to open two separate Oracle ...
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27 views

Error Scipy in QGIS SCP plugin

After clipping I am receiving these errors. I was clipping some satellite images from Sentinel 2 via SCP plugin but QGIS is not processing it. I already posted my problem with Scipy where in QGIS 3.8 ...
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2answers
44 views

Running parallel r.mapcalc in GRASS

I have thousands raster maps (3652, named raster_name.1, raster_name.2,... raster_name.x,... raster_name.3652) and for each map I want to do the r.mapcalc-threshold operation below here: ...
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38 views

Can I make QGIS export one thing at the time?

While I am exporting a large amounts of TIFF files for my work, I am having a small bottleneck in my workflow. Up until now I have devided the TIFF images in smaller pieces so that my computer can ...
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77 views

QGIS: How to speed up raster processing?

Is there any way to speed up raster processing in QGIS? I have seen discussion about speeding up rendering and querying, but not processing. I am using SAGA tools to calculate morphometrics and the ...
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1answer
46 views

Multiprocessing ERROR 000210 Cannot create output 'name' Failed to execute Intersect

I am trying to use multiprocessing to process intersects between polygons and points for a list of states and territories (the data sets for the points are large, so my hope was that the ...
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1answer
199 views

How can I optimize the processing time of the zonal_stats module using multiprocessing in Python?

I am carrying out a spectral feature extraction in Python 3 starting from an 8-band image and a shapefile (consisting of about a million polygons) superimposed on it. I calculate the mean and standard ...
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47 views

Two tasks at same time in QGIS Modeler

I am new to using the graphic modeler and I do not know how to do certain actions. I have several treatments to perform on the basis of a buffer zone. Indeed, I have to polygonize 2 raster (which we ...
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0answers
57 views

Optimising use of st_within for parallelisation

I'm trying to use st_within() to calculate points within polygons on a fairly complex shapefile. This operation tends to take 4-5 hours which is a bummer for debugging the code. I have access to a ...
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1answer
452 views

Multi-threaded compression in rasterio?

For writing large raster files (e.g. satellite image GeoTIFFs) to disk, the throughput rate tends to be limited by the compression algorithm rather than by the raw disk IO. (Benchmarks: 1, 2.) This is ...
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177 views

QGIS parallel processes

I am processing a bunch of GPS data using a Qgis python script. The processing takes a LONG time to execute and when it is executing I notice that only a single CPU is pinned at 100%, the remaining ...
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2answers
449 views

Definitive list of QGIS multiprocessing tools?

This question is not as straightforward as it seems, but can be summed up with the following: Is there a definitive list of geoprocessing tools for QGIS that currently support multithreaded ...
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1answer
197 views

Parallel processing on rasterstack using Raster and Parallel Packages

I want to run BFAST on a raster stack (768 Landsat NDVI) in parallel processing. In order to illustrate the problem, I used the following reproducible code: Load necessary packages; library(raster)...
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1answer
1k views

Parallel processing in Pandas

Using this implementation of parallelization raises an ImportError: cannot import name 'Parallel' from 'multiprocessing' The following code tries parallelization with the "denominator" function and ...
5
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1answer
181 views

Parallel processing in QGIS3 on Windows system

I am working on a big vector data set with more than 2.4 million features containing 10x10m squares. I wrote a small script in Python to delete uninteresting fields and perform calculations on the ...
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203 views

Running Standalone PyQGIS Script with Multiprocessing?

Is it possible to run a standalone PyQGIS script using multiprocessing for better performance? I'm creating 1,800 rendered map images and would like to run it across 4 processes to speed it up. If I ...
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1answer
186 views

Multiprocess Spatial Join with Spatial Index

I'm a newbie in implementing GIS on Python, but the lack of any GIS software at the office has forced me to learn about it. I have a huge grid (a multipolygon) that I'm currently filling out with ...
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1answer
80 views

Using all processor cores when exporting map to TIFF using ArcGIS Desktop?

By default, ArcGIS Desktop uses only one processor core when you export a map. Esri help talks about the possibility of setting environment parameters for geoprocessing tools, but found nothing about ...
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101 views

Arcpy multiprocessing arcpy.Select_analysis

I have the following script: import arcpy from arcpy import env import datetime import os env.workspace = r"Q:\\SDE\Direct Connection to Contours.sde" dataFC = arcpy.ListFeatureClasses("","","...
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1answer
97 views

Clipping Raster Mosiac Simultaneously Within Separate ArcPy Scripts?

I have a large raster mosaic dataset that I would like to clip within several scripts simultaneously, but whenever I run two instances of a script simultaneously one always fails with the error: ...
5
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1answer
395 views

Parallelize Extracting Large Raster Values (one band) to Points

I have sf data with single point geometries (points) and a 23,000 x 18,000 elevation RasterLayer with a single band, loaded from a geotiff (elev). They have the same CRS. I want to extract the ...
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0answers
527 views

asyncio with multiprocessing

I am trying to run a multiprocessing on a zonal statistic in pure Python. I am new on it. I have to apply a zonal statistic with a shapefile with more than 6 million features on a taster of 6 GBs (...
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1answer
173 views

Enable “Render layers in parallel using many CPU cores” from python console QGIS [closed]

How can I enable "Render layers in parallel using many CPU cores" option from QGIS python console?
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0answers
1k views

Multiprocessing with geopandas

I am learning how to implement the multiprocessing with spatial data using the module multiprocessing. I am trying to implement a spatial intersection between a polygon file and a grid file. I am ...
2
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1answer
199 views

How to use multiprocessing with Make Route Analysis Layer tool

I am using ArcGIS 10.4.1 and Network Analyst extension. As an IDE i use Spyder and Python version 2.7. I created a script where there is a method with the following arguments. def ra(EndPoint, ...
2
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1answer
529 views

Dividing a large raster into blocks for iteration in R

I have very big rasters for processing (#pixels >1,5*10^10) for this project I am working on. Simple functions such as finding the area of a pixels with a particular value, across the entire raster 1) ...
4
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1answer
609 views

Python rtree and parallelized code

I'm trying to parallelize with multiprocessing.Pool() some processes that involve queries of R-trees. In the non-parallel procedure, it works as expected. But when I try to do it in parallel (even ...
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0answers
118 views

Parallel optimization for query over LiDAR dataset

I'm using PostGIS + pointcloud to store a huge dataset of LiDAR point (2M patches of 600points) I query this database to obtain the altimetic profile between two points. At the moment I have a huge ...
2
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0answers
707 views

Spatial analysis and parallel processing in R

I am trying to do a point-in-poly analysis using R. I have 4.5 million points and 5k polygons. This is computationally intensive. I was pointed to parallel processing through another post and tried to ...
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0answers
31 views

Multiprocessing GALayerToRasters

I'm new to ArcPy and am creating a script to automate some interpolation work. I have multiple GA Layers outputted by an Empirical Bayesian Kriging interpolation (using arcpy....
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1answer
76 views

Converting polylines to polygons in ArcGIS using multiprocessing

I am attempting to convert 15 feature classes containing roughly 70,000 contours each into polygons record by record. Using my current code, each feature class takes roughly 16 hours on my current ...
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0answers
103 views

arcpy and multiprocessing: switch workflow to shapefiles to avoid schemalocks

I need to processe a large dataset through a bunch of interwoven scripts using arcpy. On a small test dataset my workflow functions fine so far but when it comes to the large dataset i see no other ...
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2answers
358 views

Using MultiProcessing With Update Cursor?

I am trying to use multiprocessing to help me run a tool that will clip a feature and sum an attribute in it. The tool needs to iterate through about 24,000 rows of a featureclass while doing this. ...
5
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1answer
2k views

R - multicore approach to extract raster values using spatial points

It might look like this question is duplicated, but I'm asking about data extraction by points, rather than by polygons, and I couldn't find hints about point extraction. Therefore, please bare with ...
2
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1answer
566 views

Does anyone already parallelized mosaic function for rasters in R?

Does anyone already paralleled mosaic function for rasters in R? It seems that snow still doesn´t deal with this on an automatic way. The idea is something like this: r1<-stack("fit__test23KLR....
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324 views

Multiprocessing Script Tool doesn't crash but will not function

I've made created a script that uses multiprocessing to break up a very large point dataset into pieces and extract values from 2 different rasters to them. When I tested it using the command line ...
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3answers
4k views

How parallelize the extract function for raster files in R?

I´m trying to parallelize a simple "extract" operation like this: UseCores<-detectCores() -1 cl<- makeCluster(UseCores) registerDoParallel(cl) all.test.poly_period.test<-extract(stack.ts, ...
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1answer
237 views

PyWPS with python multiprocessing

I have a python script that runs a set of queries in parallel using multiprocessing.pool and map_async. The script from @Aaron works perfectly. Now I want to integrate the same functions into a ...
4
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2answers
4k views

Processing multiple files simultanously using python

I have 11000 point shapefiles to run Near tool on against another point shapefile. I am looking for a way to process 10 files at the same time. Is there a way to process so many files using Python ...
13
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1answer
5k views

Does GDAL support parallel processing?

I would like to speed up the process corresponding to this command: gdalwarp -t_srs EPSG:4326 -overwrite input.ntf output.tif Is there a way to use parallel processing in GDAL? Semi-offtopic: If not,...
5
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1answer
1k views

Multiprocessing in a QGIS Plugin

I have developed a QGIS plugin that processes an image using a bunch of other information, but it runs slowly. I would like to parallelize, as I can do with Multiprocessing.Process outside a QGIS ...
4
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2answers
2k views

How to achieve parallel Kriging in R to speed up the process?

I have tried the gstat package in R to perform bathymetry predictions based on Kriging interpolation methods. However, the process is very time consuming due the large amount of sampling data I'm ...
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2answers
1k views

Multiplication of two raster stack with R using multicore parallel processes

I am working with two global raster stacks, each containing 60 layers using the R Software. The layers are global raster files (in GTiff format) at a resolution of 5 min of arc. The first stack ...
2
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1answer
709 views

Combining python (parallel) multiprocessing toolbox with arcpy

I'm trying to cut down on arcpy processing time by using the python multiprocessing toolbox. Using the example from http://wltrimbl.github.io/2014-06-10-spelman/intermediate/python/04-multiprocessing....
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2answers
2k views

Full utilization of CPU-cores with gdalwarp

I need to process many large GeoTiff files with gdalwarp. For this I have used the following command: gdalwarp -r cubic -s_srs EPSG:25832 -t_srs EPSG:3857 -cutline shapefile.shp -crop_to_cutline -...

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